Unit convenor and teaching staff |
Unit convenor and teaching staff
Convenor
A/Prof Ian Wright
Contact via email (preferred) or phone (02 9850 4228)
E8C210
Consultation hours yet to be finalised
Guest Lecturer
A/Prof Brian Atwell
Contact via email or phone (02 9850 8224)
E7B244
Guest Lecturer
Prof Belinda Medlyn
Contact via email
Guest Lecturer / prac leader
Dr Ross Peacock
Contact via email
Technical Staff
Muhammad Masood
Contact via email preferred
F5A427
Tutor
Emma Gray
Expert in plant identifications
Alison Downing
Expert in plant identifications
Karen Marais
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Credit points |
Credit points
3
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Prerequisites |
Prerequisites
39cp including (BIOL227 or BIOL210 or ENVE266)
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Corequisites |
Corequisites
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Co-badged status |
Co-badged status
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Unit description |
Unit description
This unit draws together elements of plant ecology, evolution and ecophysiology, and will be useful for students with interests at many scales, including plant conservation, ecology, and environmental science. Topics will include: An overview of Australian and global plant communities; Methods for describing and sampling vegetation; Plant functional traits and ecological strategies; Basic physiology of photosynthesis, respiration and plant water use; Plant functions and fluxes at landscape-scale; Impact of climate change on plants and communities.
Fieldwork is an important component of the unit. Students also gain experience in plant identification and in data analysis. A basic understanding of statistics is expected.
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Information about important academic dates including deadlines for withdrawing from units are available at https://www.mq.edu.au/study/calendar-of-dates
On successful completion of this unit, you will be able to:
In order to complete this unit satisfactorily it is mandatory to:
Preparation of written reports
Please use the following list to check your assignments before electronic submission.
Note: written feedback on written assessment tasks will be provided within 3 weeks of submission.
Referencing
Both written reports (Assessments 1 and 3, below) will require references. The references you consult may include textbooks, edited books or scientific journals. References should be listed in alphabetical order at the end and are not to be included in the word count.
There are different styles of referencing – each journal has its own individual style. For BIOL347 this year we have chosen to follow the style of Austral Ecology journal. For example,
Book:
Atwell B. J., Kriedemann P. E. & Turnbull C. G. N. (1999) Plants in action: adaptation in nature, performance in cultivation. MacMillan Education Australia, Melbourne.
Chapter in edited book:
Cornelissen J. H. C., Castro-Diez P. & Carnelli A. L. (1998) Variation in relative growth rate among woody species. In: Inherent variation in plant growth. Physiological mechanisms and ecological consequences (eds H. Lambers, H. Poorter and M. M. I. Van Vuuren) pp. 363-92. Backhuys Publishers, Leiden.
Journal article:
Grime J. P. & Hunt R. (1975) Relative growth-rate: its range and adaptive significance in a local flora. J Ecology 63, 393-422.
In the main text of your report these sources would be cited as (Atwell et al. 1999; Cornelissen et al. 1998; Grime & Hunt 1975). Consult a recent issue of the journal if unsure about how to cite and format literature sources.
Penalties
5% of the marks for the written assignments will be deducted for each day they are late, and assignments will not be accepted for marking if more than 10 days overdue. Exceptions can be granted (by the Convenor) if there are sufficiently serious medical or other extenuating circumstances (appropriate supporting documentation should be provided).
Penalties will be applied for reports being noticeably over the word limit, and increasingly so the more over the limit they are.
Plagiarism. Students are required to submit Assignments 1 and 3 via the plagiarism detection software Turnitin. This can be accessed on the unit’s iLearn website. Your assessment task will be automatically compared to work of your classmates, previous students from Macquarie and other universities, and with material available on the Internet. The results of the analysis will be sent to the unit Convenor. Any evidence of plagiarism will be dealt with following University policy. The penalties imposed by the University for plagiarism are serious and may include loss of marks, referral to a Faculty disciplinary committee, or even expulsion from the University.
Name | Weighting | Due |
---|---|---|
Vegetation analysis prac | 20% | 07/09/2015 |
Seminar on a journal article | 10% | 23/09/2015 |
Seedling growth prac | 25% | 19/10/2015 |
Class participation | 10% | continuing |
Final examination | 35% | TBA |
Due: 07/09/2015
Weighting: 20%
Assessment 1. Vegetation communities of Dog Pound Creek Reserve
You are asked to submit a report on the practical work conducted at Dog Pound Creek and follow-up data analysis (first on-campus session, August 15-16). The report should describe the vegetation communities of the site and how these relate to environmental factors (more details will be given during the on-campus session and in prac notes, downloadable from iLearn). Your report should be written in the style of a scientific paper with an Abstract, Introduction, Methods, Results and Discussion. You should also include references cited, figures & tables as appropriate. Word count (maximum; excluding references): 3000 words. Journal style: Austral Ecology.
Due: 23/09/2015
Weighting: 10%
Assessment 2: Seminar on a journal article of your choice
You are asked to choose a journal article published in the last 5 years on a plant ecology, ecophysiology or vegetation science topic that interests you, and during the second on-campus session (Sept 23-25) to present an 8 minute talk (with a further 2 minutes for questions) that is a summary and critical appraisal of the article. Students will be assessed on the seminar content and presentation quality, and their ability to answer questions.
When giving your seminar one of the staff will give a signal at 7 minutes, meaning you have one minute to finish up. If you continue talking much into the 2 minutes set aside for questions the “ability to answer questions” component of your mark will suffer. (so, please keep to time!)
A data projector and laptop will be available for Powerpoint or PDF presentations. Please bring your presentation on a USB drive disk (that has recently been checked for viruses!). Include in your talk:
Articles may be found in journals such as Austral Ecology, Australian Journal of Botany, Ecology, Ecology Letters, Functional Ecology, Functional Plant Biology, Global Ecology & Biogeography, Journal of Ecology, Journal of Vegetation Science, Journal of Biogeography.
Due: 19/10/2015
Weighting: 25%
Assessment 3: Written report on lab-based prac
You are asked to submit a report on the Seedling Traits and Growth Rates practical. This prac will be introduced during the first on-campus session, and is the chief focus of the second on-campus session. Maximum seedling growth rates achieved under near-optimal growth conditions are widely regarded as a key element of plant ecological strategy. The over-arching question in this prac is: "What plant traits are the key drivers of differences among species in their seedling growth rates?". We are growing in the glasshouses seedlings of a variety of local native species, with half the plants grown under elevated atmospheric CO2 concentration and half under ambient CO2. In your own time (and in conjunction with our class Technician and/or Tutor) students will work as groups to make various trait measurements on glasshouse-grown seedlings (during semester weeks 5-6), or harvest seedlings for measurements of leaf areas, biomass etc (during week 7). During the second on-campus session we will process plant material so as to calculate seedling growth rates and other traits, compile data into spreadsheets, discuss research questions, and start analyses.
A written report on this work will be due on October 19th. Your report should be written in the style of a scientific paper with an Abstract, Introduction, Methods, Results and Discussion. You should also include references cited, figures & tables as appropriate. Maximum length, excluding references is 3000 words. Journal style: Austral Ecology.
Due: continuing
Weighting: 10%
Assessment 4: Class participation
You will be assessed for your participation in all aspects of the on-campus sessions (e.g., contributing to field tasks, submitting data sheets, asking engaged questions, participating in group discussions, asking questions during question time of other student’s talks).
Internal students: as described under “Assessment 3: Written report on lab-based prac”, during weeks 5-7 you are expected to collect ecophysiological trait data on glasshouse-grown seedlings. This activity contributes substantially to your mark for class participation.
External students who are unable to make on-campus trait measurements for Assessment 3 during weeks 5-7 (see above) will be given a small extra assessment task which will instead contribute to their formal mark for class participation:
You are asked to submit directly to the unit Convenor (by email, by Sept 23) a one-page justification for the article you chose for your seminar. Please provide the publication details of the article (authors, year, title, journal, volume and page numbers) and a short summary of the general background, questions addressed, approaches used and key findings. Justify why you think this is a good choice for your oral seminar. Do not just repeat the Abstract of the paper – it must be in your own words.
Due: TBA
Weighting: 35%
Assessment 5: Final examination
The final examination will consist of a series of multiple choice and short-answer questions that are designed to test understanding of the concepts taught in this course. Length: 3 hours, plus 10 minutes reading time.
Requirements for Practical classes
The work carried out during practical classes is an important and integral part of the course. You must read, download and either print the prac notes to bring to each class, or bring them on a laptop or tablet.
Laboratory requirements
Field requirements
NOTE 1: The field work will require a short 10 minute walk into a reserve and working in uneven terrain. Any students with medical issues or requiring assistance should indicate this on their fieldwork participation form. All students must submit this form otherwise they cannot participate in the fieldwork. Please submit this form, via iLearn, by Wednesday 5th August.
NOTE 2: After rain there can be rather a lot of leeches present at Dog Pound Creek. Leeches are non-toxic and do not carry disease, but they are still a nuisance. To minimize chances of leech problems we suggest tucking your pants into your socks, shirts into pants, etc, and liberally applying insect repellant to your shoes, clothes and exposed skin. Initially leeches can be removed by flicking, but once well attached the best way to remove a leech is with salt. Apply a band-aid immediately, since they inject an anti-coagulant to ensure a nice blood flow. (MQ field staff have First Aid kits and are accredited in first aid). Ticks are a possibility but can be readily detached, are also discouraged by insect repellant.
Recommended Reading
There is no set textbook for this subject. Recommended books (all available on Reserve in the library) that, between them, cover many of the topics dealt with in lectures include:
Most or all lectures will include a list of key readings (journal articles, book chapters etc). Where possible we will make these available, whether through the Library Reserve or through the unit iLearn page.
Technology Used and required
All course content will be made available via the iLearn unit webpage (URL for iLearn is: http://ilearn.mq.edu.au/). You are expected to use iLearn for:
Basic multimedia software (e.g., Windows Media Player or Quicktime) will be needed to listen to recorded lectures. Students will be required to use appropriate software, particularly Excel, for data analysis and graphing. For the vegetation data analysis prac we will pre-load PC-ORD software onto University computers.
Lectures will be held on Mondays and Tuesdays, from 10-11 am, in the E8A 386 tutorial room. (“A” wing of E8 building, level 3). Lectures will be made available as PDFs and audio files via iLearn.
Compulsory on-campus sessions are scheduled for Sat-Sun August 15-16, and Wed-Fri September 23-25. These block practicals are compulsory for all students (internal and external). On Aug 15 we will work for much of the day in the field near Dog Pound Creek, Thornleigh (transport will be provided to/from the University to this location). On other days we will be based at the University. Full information will be posted on the unit’s iLearn website well in advance of the on-campus sessions. Most likely they will run from 9.00 am – 5.30 pm, with a slightly earlier start on Aug 15.
Unless otherwise specified we will meet at the beginning of each day at the Glasshouse laboratories (F5A400) at the top of the F5A car park. To get to the glasshouse laboratories from the back of E8C, look to your right across the main campus walkway. The multi-level parking structure you see is the F5A carparks. Go across the main campus walkway, continue on along the back wall of the E6B building and you'll see a set of stairs next to a lift shaft. Go to the top of the stairs and turn left and go through the gate. The building to your right is the Glasshouse labs. The front of the building is the potting up area, the main lab is located at the back of the far end of the building.
DRAFT LECTURE TIMETABLE
** Lecture topic and/or lecturer still to be finalised
Week |
Date |
Day |
L# |
Lecture |
Lecturer |
Theme |
1 |
27-Jul |
Mon |
1 |
Introduction (course organisation, texts, assessments). / World vegetation, biomes etc. |
Wright |
Vegetation ecology |
1 |
28-Jul |
Tues |
2 |
The Australian environment and its vegetation |
Wright |
|
2 |
3-Aug |
Mon |
3 |
Australian vegetation (continued); iconic plant families. |
Wright |
|
2 |
4-Aug |
Tues |
4 |
Plant diversity, evolution, phylogenies |
Wright |
|
3 |
10-Aug |
Mon |
5 |
Systematic sampling, description and analysis of plant communities |
Peacock |
|
3 |
11-Aug |
Tues |
6 |
** Disturbance; succession; vegetation states and transitions |
Wright |
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ON CAMPUS SESSION 1, SAT-SUN AUGUST 15-16 |
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4 |
17-Aug |
Mon |
7 |
Photosynthesis [pre-recorded lecture] |
Atwell |
Resource acquisition and use |
4 |
18-Aug |
Tues |
8 |
Respiration [pre-recorded lecture] |
Atwell |
|
5 |
24-Aug |
Mon |
9 |
Water physiology and the plant hydraulic system |
Atwell |
|
5 |
25-Aug |
Tues |
10 |
Carbon balance: GPP, NPP, NEP |
Medlyn |
|
6 |
31-Aug |
Mon |
11 |
Plant nutrient acquisition and use |
Atwell |
|
6 |
1-Sep |
Tues |
12 |
Ecosystem water use |
Medlyn |
|
7 |
7-Sep |
Mon |
13 |
Plant growth (& introduction to functional traits) |
Wright |
|
7 |
8-Sep |
Tues |
14 |
Nutrient cycling |
Medlyn |
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ON CAMPUS SESSION2, WED-FRI SEPTEMBER 23-25 |
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8 |
28-Sep |
Mon |
15 |
Plant functional traits, ecological strategies & adaptations 1 |
Wright |
Trait ecology |
8 |
29-Sep |
Tues |
16 |
Plant functional traits, ecological strategies & adaptations 2 |
Wright |
|
9 |
5-Oct |
Mon |
[public holiday] |
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9 |
6-Oct |
Tues |
17 |
Plant functional traits, ecological strategies & adaptations 3 |
Wright |
|
10 |
12-Oct |
Mon |
18 |
Invasive plants & their traits |
Leishman |
|
10 |
13-Oct |
Tues |
19 |
** Impacts of high CO2 on forests |
Zeppel |
Frontiers in plant ecology |
11 |
19-Oct |
Mon |
20 |
** Global ecology |
Keenan |
|
11 |
20-Oct |
Tues |
21 |
New data for old ideas: ecoinformatic approaches for understanding Australian plant biogeography |
Gallagher |
|
12 |
26-Oct |
Mon |
22 |
Global Ecophysiology |
de Kauwe |
|
12 |
27-Oct |
Tues |
23 |
Frontiers in plant functional ecology |
Wright |
|
13 |
2-Nov |
Mon |
24 |
Trait-based community assembly theory |
Falster |
|
13 |
3-Nov |
Tues |
25 |
Outroduction. Re-cap some key concepts. Info about exam. |
Wright |
** Lecture topic and/or lecturer still to be finalised.
Core lecturers are A/Prof Ian Wright, A/Prof Brian Atwell and Prof Belinda Medlyn.
Guest lecturers : Dr Ross Peacock, Prof Michelle Leishman, Dr Melanie Zeppel, Dr Rachael Gallagher, Dr Trevor Keenan, Dr Martin de Kauwe, Dr Daniel Falster.
DRAFT TIMETABLE: ON-CAMPUS SESSIONS
There are two on-campus sessions (OCS): Saturday-Sunday Aug 15-16; and Wednesday-Friday September 23-25. These are compulsory for all students.
OCS |
Date |
Activities (draft) |
1 |
Aug 15 |
|
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Aug 16 |
|
2 |
Sept 23 |
|
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Sept 24 |
|
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Sept 25 |
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Macquarie University policies and procedures are accessible from Policy Central. Students should be aware of the following policies in particular with regard to Learning and Teaching:
Academic Honesty Policy http://mq.edu.au/policy/docs/academic_honesty/policy.html
Assessment Policy http://mq.edu.au/policy/docs/assessment/policy.html
Grading Policy http://mq.edu.au/policy/docs/grading/policy.html
Grade Appeal Policy http://mq.edu.au/policy/docs/gradeappeal/policy.html
Grievance Management Policy http://mq.edu.au/policy/docs/grievance_management/policy.html
Disruption to Studies Policy http://www.mq.edu.au/policy/docs/disruption_studies/policy.html The Disruption to Studies Policy is effective from March 3 2014 and replaces the Special Consideration Policy.
In addition, a number of other policies can be found in the Learning and Teaching Category of Policy Central.
Macquarie University students have a responsibility to be familiar with the Student Code of Conduct: https://students.mq.edu.au/support/student_conduct/
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Macquarie University provides a range of support services for students. For details, visit http://students.mq.edu.au/support/
Learning Skills (mq.edu.au/learningskills) provides academic writing resources and study strategies to improve your marks and take control of your study.
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Our graduates will also be capable of creative thinking and of creating knowledge. They will be imaginative and open to experience and capable of innovation at work and in the community. We want them to be engaged in applying their critical, creative thinking.
This graduate capability is supported by:
We want our graduates to have emotional intelligence and sound interpersonal skills and to demonstrate discernment and common sense in their professional and personal judgement. They will exercise initiative as needed. They will be capable of risk assessment, and be able to handle ambiguity and complexity, enabling them to be adaptable in diverse and changing environments.
This graduate capability is supported by:
Our graduates will take with them the intellectual development, depth and breadth of knowledge, scholarly understanding, and specific subject content in their chosen fields to make them competent and confident in their subject or profession. They will be able to demonstrate, where relevant, professional technical competence and meet professional standards. They will be able to articulate the structure of knowledge of their discipline, be able to adapt discipline-specific knowledge to novel situations, and be able to contribute from their discipline to inter-disciplinary solutions to problems.
This graduate capability is supported by:
We want our graduates to be capable of reasoning, questioning and analysing, and to integrate and synthesise learning and knowledge from a range of sources and environments; to be able to critique constraints, assumptions and limitations; to be able to think independently and systemically in relation to scholarly activity, in the workplace, and in the world. We want them to have a level of scientific and information technology literacy.
This graduate capability is supported by:
Our graduates should be capable of researching; of analysing, and interpreting and assessing data and information in various forms; of drawing connections across fields of knowledge; and they should be able to relate their knowledge to complex situations at work or in the world, in order to diagnose and solve problems. We want them to have the confidence to take the initiative in doing so, within an awareness of their own limitations.
This graduate capability is supported by:
We want to develop in our students the ability to communicate and convey their views in forms effective with different audiences. We want our graduates to take with them the capability to read, listen, question, gather and evaluate information resources in a variety of formats, assess, write clearly, speak effectively, and to use visual communication and communication technologies as appropriate.
This graduate capability is supported by:
As local citizens our graduates will be aware of indigenous perspectives and of the nation's historical context. They will be engaged with the challenges of contemporary society and with knowledge and ideas. We want our graduates to have respect for diversity, to be open-minded, sensitive to others and inclusive, and to be open to other cultures and perspectives: they should have a level of cultural literacy. Our graduates should be aware of disadvantage and social justice, and be willing to participate to help create a wiser and better society.
This graduate capability is supported by:
We want our graduates to be aware of and have respect for self and others; to be able to work with others as a leader and a team player; to have a sense of connectedness with others and country; and to have a sense of mutual obligation. Our graduates should be informed and active participants in moving society towards sustainability.
This graduate capability is supported by:
The BIOL347 course code was previously used for Plant Diversity & Conservation, now rested. In 2015 BIOL347 refers to a new course, “Plants & Ecosystems”. This course draws from the old Plant Diversity & Conservation and from another rested subject BIOL313 Plants: Cells to Ecosystems, but also includes substantial new material on plant functional ecology, and from cutting edge research by high-calibre early-career plant scientists within the Department of Biological Sciences (via a series of guest lectures).