Unit convenor and teaching staff |
Unit convenor and teaching staff
Unit Convenor
Ian Paulsen
Contact via ian.paulsen@mq.edu.au
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Credit points |
Credit points
3
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Prerequisites |
Prerequisites
39cp including CBMS224
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Corequisites |
Corequisites
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Co-badged status |
Co-badged status
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Unit description |
Unit description
Molecular biology is a central science in twenty-first century biology and biotechnology. Understanding the fundamentals of molecular biology is essential for many other fields in the life sciences, including microbiology, cell biology, immunology, and development. Molecular biology makes a significant and increasing contribution to major sectors of our society including agriculture and medicine, and is also important in environmental science and forensics. In this unit we explore topics that allow students to obtain an advanced understanding of the mechanisms of molecular biology, including those of DNA replication and recombination, prokaryotic gene expression, eukaryotic gene expression, mobile elements, the functions of the nucleus, and epigenetics. We also address topics on the rapidly changing technologies in molecular biology, including those used in genome sequencing, metagenomics, and microarray analysis. Practical sessions complement the lectures and provide students with hands-on experience with a range of critical laboratory skills including those required for DNA and RNA isolation, PCR and RT-PCR, cloning, and bioinformatics. Students gain experience in working with both bacterial and eukaryotic systems in the laboratory classes so that their skills and experience are valuable for a variety of positions in both industry and research.
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Information about important academic dates including deadlines for withdrawing from units are available at https://www.mq.edu.au/study/calendar-of-dates
On successful completion of this unit, you will be able to:
Name | Weighting | Due |
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Mid Semester Test | 10% | Apr 30/May 1 |
Final Examination | 50% | University Examination Period |
Laboratory Reports | 25% | Apr 16; Apr 23; May 28 |
Bioinformatic Report | 10% | June 4 |
Problem Set | 5% | June 4/5 |
Due: Apr 30/May 1
Weighting: 10%
Multiple Choice Test
Due: University Examination Period
Weighting: 50%
3 hr exam
Due: Apr 16; Apr 23; May 28
Weighting: 25%
3 lab reports;
1500 words
each
Due: June 4
Weighting: 10%
Report on Bioinformatic Analysis
Due: June 4/5
Weighting: 5%
12 Question Problem Set in Prac Manual
Classes
There are two weekly lectures of 1 hour (E6A102, 11am Wednesday; E7B100, 1 pm Thursday) and a weekly practical session of 3 hours (F7B102-105, 1 – 4pm Wednesday or 9am-12pm Thursday). In weeks 10 and 11, the practical class is replaced with a bioinformatic workshop. Attendance at practical sessions (and bioinformatic workshop) is a compulsory component of this unit. Lecture recordings and graphics slides are available online through iLearn (https://ilearn.mq.edu.au/login/MQ/), although lecture attendance in person is highly recommended. The practical manual is also available online through iLearn.
Required and Recommended Texts
The course syllabus is defined by all of the subject material presented in lectures and practicals, much of which is beyond standard textbooks. The prescribed text for this unit is Molecular Biology Fifth edition by Robert F Weaver. Available from the Co-op bookshop. The following texts may also be useful and are available in the library: GenesIX by Benjamin Lewin The Lactose Operon by Beckwith and Zipser Mobile Genetic Elements by Sherratt Molecular Cloning: A Laboratory Manual by Maniatis, Fritsch and Sambrook An Introduction to Genetic Engineering by Des Nicholl
Technology Requirements
Within this Unit, you will be introduced to Web-based search engines that are commonly used in molecular biology. Our expectation is that you will be able to readily access the internet and have a computer available to you for web browsing and preparation of your laboratory reports. Handwritten reports will not be accepted. Your laboratory reports will be submitted and circulated via the online Turnitin program, for which access instructions will be given at submission time. Your practical reports will require you to carry out minor computational tasks, for which a calculator and access to basic statistical tools will be required. We place a large emphasis on correct referencing style in all your reports, and use of the program EndNote is encouraged, but not essential.
Date |
Lecture |
Title |
Lecturer |
Mar 5 |
1 |
Introduction/What is Molecular Biology/Genome Structure |
Haynes |
Mar 6 |
2 |
Gene Organization/function |
Haynes |
Mar 12 |
3 |
Molecular Biology Techniques |
Haynes |
Mar 13 |
4 |
Molecular Biology Techniques |
Haynes |
Mar 19 |
5 |
Molecular Cloning |
Haynes |
Mar 20 |
6 |
Tools for studying Gene Activity |
Haynes |
Mar 26 |
7 |
Transcription in Prokaryotes |
Paulsen |
Mar 27 |
8 |
Structure of Prokaryotic Operons |
Paulsen |
Apr 2 |
9 |
Bacterial Gene Regulation |
Paulsen |
Apr 3 |
10 |
Transcription in Eukaryotes |
Paulsen |
Apr 9 |
11 |
Eukaryotic Gene Regulation |
Paulsen |
Apr 10 |
12 |
Nucleosomes/Histones/Chromatin |
Paulsen |
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Semester break
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Apr 30 |
13 |
Messenger RNA splicing |
Paulsen |
May 1 |
14 |
Mechanism of Translation |
Paulsen |
May 7 |
15 |
Ribosomes and transfer RNA |
Paulsen |
May 8 |
16 |
DNA replication |
Paulsen |
May 14 |
17 |
DNA recombination |
Paulsen |
May 15 |
18 |
DNA repair |
Paulsen |
May 21 |
19 |
Mobile DNA elements |
Paulsen |
May 22 |
20 |
Mobile DNA elements |
Paulsen |
May 28 |
21 |
Genome Sequencing |
Paulsen |
May 29 |
22 |
Genomes, Pan-Genomes and Metagenomics |
Paulsen |
Jun 4 |
23 |
Bioinformatics and Genome Annotation |
Paulsen |
Jun 5 |
24 |
Functional Genomics and Systems Biology |
Paulsen |
Jun 11 |
25 |
Revision |
Paulsen |
Jun 12 |
26 |
Revision |
Paulsen |
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